Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm18041-201ENSMUST00000218210 618 ntBASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 AV026068-213ENSMUST00000223675 1171 ntBASIC12.66□□□□□ -0.38
Sf3b6P59708 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm11764-201ENSMUST00000120221 623 ntBASIC12.65□□□□□ -0.38
Sf3b6P59708 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm6443-201ENSMUST00000203599 874 ntBASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm7787-201ENSMUST00000216858 688 ntBASIC12.65□□□□□ -0.38
Sf3b6P59708 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sf3b6P59708 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b6P59708 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.65□□□□□ -0.39
Sf3b6P59708 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm37230-201ENSMUST00000194491 818 ntBASIC12.64□□□□□ -0.39
Sf3b6P59708 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3b6P59708 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.64□□□□□ -0.39
Sf3b6P59708 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3b6P59708 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms