Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cxcl12P40224 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm15808-201ENSMUST00000119046 604 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm8810-201ENSMUST00000172895 754 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm18753-201ENSMUST00000201000 566 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm29705-201ENSMUST00000212598 474 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cxcl12P40224 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cxcl12P40224 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Mir877-201ENSMUST00000104738 85 ntBASIC14.55□□□□□ -0.08
Cxcl12P40224 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Mir5132-201ENSMUST00000175166 71 ntBASIC14.55□□□□□ -0.08
Cxcl12P40224 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.55□□□□□ -0.08
Cxcl12P40224 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Cxcl12P40224 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.55□□□□□ -0.08
Cxcl12P40224 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.55□□□□□ -0.08
Cxcl12P40224 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl12P40224 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.55□□□□□ -0.08
Cxcl12P40224 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.54□□□□□ -0.08
Cxcl12P40224 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Gm1335-201ENSMUST00000121653 386 ntBASIC14.54□□□□□ -0.08
Cxcl12P40224 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.54□□□□□ -0.08
Cxcl12P40224 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.54□□□□□ -0.08
Cxcl12P40224 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.54□□□□□ -0.08
Cxcl12P40224 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.54□□□□□ -0.08
Cxcl12P40224 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cxcl12P40224 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Cxcl12P40224 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cxcl12P40224 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.53□□□□□ -0.08
Cxcl12P40224 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Gm26083-201ENSMUST00000157904 193 ntBASIC14.53□□□□□ -0.08
Cxcl12P40224 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cxcl12P40224 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.53□□□□□ -0.08
Cxcl12P40224 Gm42550-201ENSMUST00000201553 960 ntBASIC14.53□□□□□ -0.08
Cxcl12P40224 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms