Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC21.02■□□□□ 0.96
Chd1P40201 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC21.02■□□□□ 0.96
Chd1P40201 Mir1943-201ENSMUST00000158276 73 ntBASIC21.02■□□□□ 0.96
Chd1P40201 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chd1P40201 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC21.02■□□□□ 0.96
Chd1P40201 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Gm9826-201ENSMUST00000029124 1299 ntBASIC21.02■□□□□ 0.96
Chd1P40201 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Chd1P40201 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1P40201 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1P40201 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1P40201 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1P40201 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC21.01■□□□□ 0.95
Chd1P40201 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC21.01■□□□□ 0.95
Chd1P40201 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd1P40201 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd1P40201 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd1P40201 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC21.01■□□□□ 0.95
Chd1P40201 Gm10109-202ENSMUST00000206890 1211 ntBASIC21.01■□□□□ 0.95
Chd1P40201 Gm18212-201ENSMUST00000211678 889 ntBASIC21.01■□□□□ 0.95
Chd1P40201 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Chd1P40201 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd1P40201 Gm13316-201ENSMUST00000140537 691 ntBASIC21.01■□□□□ 0.95
Chd1P40201 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1P40201 Gm8176-201ENSMUST00000191297 1099 ntBASIC21.01■□□□□ 0.95
Chd1P40201 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC21■□□□□ 0.95
Chd1P40201 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Gm9083-201ENSMUST00000120423 819 ntBASIC21■□□□□ 0.95
Chd1P40201 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC21■□□□□ 0.95
Chd1P40201 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Chd1P40201 Gm18584-201ENSMUST00000203098 964 ntBASIC21■□□□□ 0.95
Chd1P40201 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC21■□□□□ 0.95
Chd1P40201 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Chd1P40201 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chd1P40201 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chd1P40201 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chd1P40201 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC21■□□□□ 0.95
Chd1P40201 Zkscan14-203ENSMUST00000198959 2243 ntBASIC21■□□□□ 0.95
Chd1P40201 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.99■□□□□ 0.95
Chd1P40201 Gm14726-201ENSMUST00000120623 896 ntBASIC20.99■□□□□ 0.95
Chd1P40201 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC20.99■□□□□ 0.95
Chd1P40201 Gm45770-201ENSMUST00000212105 616 ntBASIC20.99■□□□□ 0.95
Chd1P40201 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chd1P40201 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chd1P40201 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.99■□□□□ 0.95
Chd1P40201 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.99■□□□□ 0.95
Chd1P40201 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd1P40201 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Chd1P40201 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chd1P40201 Gm11628-201ENSMUST00000117568 171 ntBASIC20.98■□□□□ 0.95
Chd1P40201 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC20.98■□□□□ 0.95
Chd1P40201 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Chd1P40201 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Chd1P40201 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd1P40201 Gm10434-201ENSMUST00000101158 471 ntBASIC20.98■□□□□ 0.95
Chd1P40201 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC20.98■□□□□ 0.95
Chd1P40201 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chd1P40201 Gstp-ps-201ENSMUST00000195526 631 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms