Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Gm27838-201ENSMUST00000184829 128 ntBASIC13.82□□□□□ -0.2
Hoxc11P31313 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.82□□□□□ -0.2
Hoxc11P31313 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.82□□□□□ -0.2
Hoxc11P31313 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc11P31313 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc11P31313 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Gm6222-201ENSMUST00000120787 396 ntBASIC13.81□□□□□ -0.2
Hoxc11P31313 Gm15487-201ENSMUST00000122373 465 ntBASIC13.81□□□□□ -0.2
Hoxc11P31313 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Olfr286-202ENSMUST00000205305 969 ntBASIC13.81□□□□□ -0.2
Hoxc11P31313 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc11P31313 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc11P31313 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.8□□□□□ -0.2
Hoxc11P31313 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.8□□□□□ -0.2
Hoxc11P31313 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Gm5186-201ENSMUST00000218781 920 ntBASIC13.8□□□□□ -0.2
Hoxc11P31313 Shd-206ENSMUST00000225145 998 ntBASIC13.8□□□□□ -0.2
Hoxc11P31313 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc11P31313 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc11P31313 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc11P31313 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc11P31313 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc11P31313 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc11P31313 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms