Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.57□□□□□ -0.4
Cd28P31041 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.57□□□□□ -0.4
Cd28P31041 Gm33142-201ENSMUST00000193913 867 ntBASIC12.57□□□□□ -0.4
Cd28P31041 Gm6089-201ENSMUST00000197666 938 ntBASIC12.57□□□□□ -0.4
Cd28P31041 Gm2451-201ENSMUST00000199447 999 ntBASIC12.57□□□□□ -0.4
Cd28P31041 Gm10290-201ENSMUST00000200451 999 ntBASIC12.57□□□□□ -0.4
Cd28P31041 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Cd28P31041 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.57□□□□□ -0.4
Cd28P31041 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cd28P31041 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cd28P31041 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Gm7222-201ENSMUST00000117512 906 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm13836-201ENSMUST00000121159 501 ntBASIC12.56□□□□□ -0.4
Cd28P31041 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.56□□□□□ -0.4
Cd28P31041 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Gm44357-201ENSMUST00000195897 142 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm19658-201ENSMUST00000196231 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44367-201ENSMUST00000196836 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44350-201ENSMUST00000197197 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44390-201ENSMUST00000197533 144 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44313-201ENSMUST00000198018 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44486-201ENSMUST00000198508 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44314-201ENSMUST00000199263 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44394-201ENSMUST00000199558 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44484-201ENSMUST00000199873 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44466-201ENSMUST00000200264 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Gm44359-201ENSMUST00000200671 138 ntBASIC12.56□□□□□ -0.4
Cd28P31041 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cd28P31041 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.56□□□□□ -0.4
Cd28P31041 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cd28P31041 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cd28P31041 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cd28P31041 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cd28P31041 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.55□□□□□ -0.4
Cd28P31041 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cd28P31041 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.55□□□□□ -0.4
Cd28P31041 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cd28P31041 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd28P31041 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms