Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Gm13453-201ENSMUST00000118708 357 ntBASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Gm10499-201ENSMUST00000174094 934 ntBASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Gm7730-201ENSMUST00000212486 454 ntBASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.73□□□□□ -0.53
Tnfrsf9P20334 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf9P20334 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Gm15693-201ENSMUST00000120470 637 ntBASIC11.72□□□□□ -0.53
Tnfrsf9P20334 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Mir7684-201ENSMUST00000183858 60 ntBASIC11.72□□□□□ -0.53
Tnfrsf9P20334 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf9P20334 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 BC037039-201ENSMUST00000192003 2205 ntBASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.71□□□□□ -0.53
Tnfrsf9P20334 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.71□□□□□ -0.53
Tnfrsf9P20334 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms