Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NclP09405 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
NclP09405 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NclP09405 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NclP09405 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC21.12■□□□□ 0.97
NclP09405 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.12■□□□□ 0.97
NclP09405 AC153872.1-201ENSMUST00000199539 128 ntBASIC21.12■□□□□ 0.97
NclP09405 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 AC154806.6-201ENSMUST00000228192 202 ntBASIC21.12■□□□□ 0.97
NclP09405 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Gm9797-201ENSMUST00000052902 613 ntBASIC21.12■□□□□ 0.97
NclP09405 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NclP09405 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NclP09405 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
NclP09405 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NclP09405 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC21.11■□□□□ 0.97
NclP09405 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Gm28631-201ENSMUST00000190740 334 ntBASIC21.11■□□□□ 0.97
NclP09405 AC154846.1-201ENSMUST00000226278 862 ntBASIC21.11■□□□□ 0.97
NclP09405 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
NclP09405 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NclP09405 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NclP09405 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC21.1■□□□□ 0.97
NclP09405 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NclP09405 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC21.1■□□□□ 0.97
NclP09405 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
NclP09405 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC21.1■□□□□ 0.97
NclP09405 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NclP09405 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.1■□□□□ 0.97
NclP09405 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NclP09405 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NclP09405 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC21.09■□□□□ 0.97
NclP09405 Gm14928-201ENSMUST00000120198 477 ntBASIC21.09■□□□□ 0.97
NclP09405 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21.09■□□□□ 0.97
NclP09405 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC21.09■□□□□ 0.97
NclP09405 Gm28760-201ENSMUST00000185995 736 ntBASIC21.09■□□□□ 0.97
NclP09405 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC21.09■□□□□ 0.97
NclP09405 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NclP09405 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NclP09405 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
NclP09405 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NclP09405 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NclP09405 Gm10766-202ENSMUST00000194123 606 ntBASIC21.08■□□□□ 0.97
NclP09405 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.08■□□□□ 0.97
NclP09405 Gm9794-201ENSMUST00000202370 423 ntBASIC21.08■□□□□ 0.97
NclP09405 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC21.08■□□□□ 0.97
NclP09405 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NclP09405 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NclP09405 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NclP09405 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
NclP09405 Gm14451-201ENSMUST00000121581 1542 ntBASIC21.08■□□□□ 0.96
NclP09405 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NclP09405 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NclP09405 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.07■□□□□ 0.96
NclP09405 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NclP09405 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms