Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.7□□□□□ -0.06
PrnpP04925 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.7□□□□□ -0.06
PrnpP04925 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.7□□□□□ -0.06
PrnpP04925 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.7□□□□□ -0.06
PrnpP04925 Gm2495-201ENSMUST00000191160 466 ntBASIC14.7□□□□□ -0.06
PrnpP04925 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PrnpP04925 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
PrnpP04925 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.7□□□□□ -0.06
PrnpP04925 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.7□□□□□ -0.06
PrnpP04925 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.7□□□□□ -0.06
PrnpP04925 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.7□□□□□ -0.06
PrnpP04925 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
PrnpP04925 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
PrnpP04925 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PrnpP04925 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.69□□□□□ -0.06
PrnpP04925 Gm15429-201ENSMUST00000151268 798 ntBASIC14.69□□□□□ -0.06
PrnpP04925 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.69□□□□□ -0.06
PrnpP04925 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.69□□□□□ -0.06
PrnpP04925 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.69□□□□□ -0.06
PrnpP04925 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PrnpP04925 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PrnpP04925 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
PrnpP04925 Gm12742-201ENSMUST00000117326 410 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.68□□□□□ -0.06
PrnpP04925 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm8927-201ENSMUST00000181978 981 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm27772-201ENSMUST00000184900 187 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm45841-201ENSMUST00000207700 164 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Gm8463-201ENSMUST00000208573 613 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Gm3222-201ENSMUST00000071282 990 ntBASIC14.68□□□□□ -0.06
PrnpP04925 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PrnpP04925 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PrnpP04925 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PrnpP04925 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.67□□□□□ -0.06
PrnpP04925 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PrnpP04925 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PrnpP04925 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PrnpP04925 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PrnpP04925 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms