Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Vti1aO89116 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.35■□□□□ 0.05
Vti1aO89116 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Vti1aO89116 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29310-201ENSMUST00000185468 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21825-201ENSMUST00000185728 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29109-201ENSMUST00000185895 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21896-201ENSMUST00000186520 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21873-201ENSMUST00000186728 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21794-201ENSMUST00000187056 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21880-201ENSMUST00000187275 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21826-201ENSMUST00000187451 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21198-201ENSMUST00000188393 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21749-201ENSMUST00000189343 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21901-201ENSMUST00000189568 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29424-201ENSMUST00000189716 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm28599-201ENSMUST00000189838 694 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21867-201ENSMUST00000189917 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29269-201ENSMUST00000190087 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21722-201ENSMUST00000190153 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm28423-201ENSMUST00000190701 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21899-201ENSMUST00000190745 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm29667-201ENSMUST00000190817 490 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21910-201ENSMUST00000191163 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21849-201ENSMUST00000191571 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm28678-201ENSMUST00000191593 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm20910-201ENSMUST00000193268 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.35■□□□□ 0.05
Vti1aO89116 Gm21871-201ENSMUST00000194621 696 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.35■□□□□ 0.05
Vti1aO89116 Gm20445-201ENSMUST00000061905 565 ntBASIC15.35■□□□□ 0.05
Vti1aO89116 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vti1aO89116 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vti1aO89116 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vti1aO89116 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Vti1aO89116 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vti1aO89116 Gm15653-201ENSMUST00000119247 907 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Vti1aO89116 Gm15321-201ENSMUST00000121290 288 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Gm24694-201ENSMUST00000180054 110 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Gm27631-201ENSMUST00000184163 466 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Gm27663-201ENSMUST00000184839 110 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.34■□□□□ 0.05
Vti1aO89116 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.34■□□□□ 0.05
Vti1aO89116 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Vti1aO89116 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms