Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cops4O88544 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
Cops4O88544 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cops4O88544 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.16□□□□□ -0.3
Cops4O88544 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.16□□□□□ -0.3
Cops4O88544 Gm7230-201ENSMUST00000173026 815 ntBASIC13.16□□□□□ -0.3
Cops4O88544 Gm5682-201ENSMUST00000173402 505 ntBASIC13.16□□□□□ -0.3
Cops4O88544 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cops4O88544 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.16□□□□□ -0.3
Cops4O88544 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.16□□□□□ -0.3
Cops4O88544 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.16□□□□□ -0.3
Cops4O88544 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.16□□□□□ -0.3
Cops4O88544 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.16□□□□□ -0.3
Cops4O88544 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cops4O88544 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.16□□□□□ -0.3
Cops4O88544 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops4O88544 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.16□□□□□ -0.3
Cops4O88544 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.15□□□□□ -0.3
Cops4O88544 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cops4O88544 Gm7153-201ENSMUST00000117092 455 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.15□□□□□ -0.3
Cops4O88544 Gm8749-201ENSMUST00000117737 331 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Gm14042-201ENSMUST00000120139 833 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Gm6550-201ENSMUST00000187574 993 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Gm17971-201ENSMUST00000190239 806 ntBASIC13.15□□□□□ -0.3
Cops4O88544 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops4O88544 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Cops4O88544 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.15□□□□□ -0.3
Cops4O88544 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops4O88544 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops4O88544 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cops4O88544 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cops4O88544 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cops4O88544 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cops4O88544 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cops4O88544 Gm11452-201ENSMUST00000122376 690 ntBASIC13.14□□□□□ -0.31
Cops4O88544 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.14□□□□□ -0.31
Cops4O88544 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops4O88544 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops4O88544 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms