Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm5187-201ENSMUST00000117317 991 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm27514-201ENSMUST00000183692 110 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm5161-201ENSMUST00000075243 853 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.8■□□□□ 0.12
B020004C17RikJ3QP07 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Mir698-201ENSMUST00000102164 109 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm23931-201ENSMUST00000103842 109 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm40466-201ENSMUST00000212174 422 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Carlr-201ENSMUST00000181515 2574 ntBASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
B020004C17RikJ3QP07 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm22331-201ENSMUST00000158066 136 ntBASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
B020004C17RikJ3QP07 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
B020004C17RikJ3QP07 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms