Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm23931-201ENSMUST00000103842 109 ntBASIC17.09■□□□□ 0.33
NpcdF8VQB8 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NpcdF8VQB8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gm38241-201ENSMUST00000192641 898 ntBASIC17.09■□□□□ 0.33
NpcdF8VQB8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.09■□□□□ 0.33
NpcdF8VQB8 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.09■□□□□ 0.33
NpcdF8VQB8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NpcdF8VQB8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NpcdF8VQB8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NpcdF8VQB8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NpcdF8VQB8 BC037039-201ENSMUST00000192003 2205 ntBASIC17.08■□□□□ 0.33
NpcdF8VQB8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NpcdF8VQB8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NpcdF8VQB8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm12928-201ENSMUST00000117115 573 ntBASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm27243-201ENSMUST00000183964 521 ntBASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.08■□□□□ 0.32
NpcdF8VQB8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
NpcdF8VQB8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm15429-201ENSMUST00000151268 798 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm21470-201ENSMUST00000187680 696 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm37466-201ENSMUST00000195692 652 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm3961-201ENSMUST00000204425 994 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm18054-201ENSMUST00000207539 555 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.07■□□□□ 0.32
NpcdF8VQB8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NpcdF8VQB8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Gm14723-201ENSMUST00000118686 215 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NpcdF8VQB8 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.06■□□□□ 0.32
NpcdF8VQB8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms