Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.04■□□□□ 0.32
Ube4aE9Q735 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Gm27892-201ENSMUST00000185017 106 ntBASIC17.04■□□□□ 0.32
Ube4aE9Q735 Gm44719-201ENSMUST00000206404 149 ntBASIC17.04■□□□□ 0.32
Ube4aE9Q735 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.04■□□□□ 0.32
Ube4aE9Q735 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.04■□□□□ 0.32
Ube4aE9Q735 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube4aE9Q735 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.03■□□□□ 0.32
Ube4aE9Q735 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube4aE9Q735 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm15824-201ENSMUST00000119516 955 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm18062-201ENSMUST00000208020 547 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 Gm18055-201ENSMUST00000208254 547 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.02■□□□□ 0.32
Ube4aE9Q735 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 Mir497b-201ENSMUST00000093601 125 ntBASIC17.02■□□□□ 0.32
Ube4aE9Q735 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.02■□□□□ 0.31
Ube4aE9Q735 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube4aE9Q735 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Gm6244-201ENSMUST00000178732 841 ntBASIC17.01■□□□□ 0.31
Ube4aE9Q735 Mir7085-201ENSMUST00000184353 66 ntBASIC17.01■□□□□ 0.31
Ube4aE9Q735 Gm27772-201ENSMUST00000184900 187 ntBASIC17.01■□□□□ 0.31
Ube4aE9Q735 Gm2495-201ENSMUST00000191160 466 ntBASIC17.01■□□□□ 0.31
Ube4aE9Q735 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.01■□□□□ 0.31
Ube4aE9Q735 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms