Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Gm16215-201ENSMUST00000161990 637 ntBASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Gm37714-201ENSMUST00000194742 342 ntBASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Gm7730-201ENSMUST00000212486 454 ntBASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Gm18027-201ENSMUST00000218947 619 ntBASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Gm2423-201ENSMUST00000074863 733 ntBASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb9E9Q5G2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Gm10766-202ENSMUST00000194123 606 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Gm20445-201ENSMUST00000061905 565 ntBASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb9E9Q5G2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb9E9Q5G2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.71■□□□□ 0.26
Pcdhb9E9Q5G2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm21854-201ENSMUST00000179901 471 ntBASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb9E9Q5G2 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms