Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12d-1A0N8R0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Gm16198-201ENSMUST00000118766 670 ntBASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Gm5479-201ENSMUST00000160578 435 ntBASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav12d-1A0N8R0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12d-1A0N8R0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12d-1A0N8R0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12d-1A0N8R0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms