Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm17968-201ENSMUST00000194902 784 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm11543-201ENSMUST00000120758 370 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm1401-201ENSMUST00000122048 772 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm27741-201ENSMUST00000185060 237 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm44492-201ENSMUST00000197012 141 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm5364-201ENSMUST00000216789 889 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc194A0A140LIT1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Gm17271-201ENSMUST00000165535 355 ntBASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Gm27920-201ENSMUST00000183953 96 ntBASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Mir8117-201ENSMUST00000184773 107 ntBASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc194A0A140LIT1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc194A0A140LIT1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms