Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssbp3Q9D032 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssbp3Q9D032 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ssbp3Q9D032 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssbp3Q9D032 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssbp3Q9D032 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
Ssbp3Q9D032 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ssbp3Q9D032 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.15■□□□□ 0.5
Ssbp3Q9D032 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssbp3Q9D032 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ssbp3Q9D032 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssbp3Q9D032 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssbp3Q9D032 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ssbp3Q9D032 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssbp3Q9D032 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssbp3Q9D032 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ssbp3Q9D032 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssbp3Q9D032 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssbp3Q9D032 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ssbp3Q9D032 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ssbp3Q9D032 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ssbp3Q9D032 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssbp3Q9D032 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ssbp3Q9D032 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssbp3Q9D032 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssbp3Q9D032 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.11■□□□□ 0.49
Ssbp3Q9D032 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssbp3Q9D032 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ssbp3Q9D032 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ssbp3Q9D032 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ssbp3Q9D032 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Ssbp3Q9D032 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ssbp3Q9D032 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.08■□□□□ 0.48
Ssbp3Q9D032 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssbp3Q9D032 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ssbp3Q9D032 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ssbp3Q9D032 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ssbp3Q9D032 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.07■□□□□ 0.48
Ssbp3Q9D032 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.07■□□□□ 0.48
Ssbp3Q9D032 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.07■□□□□ 0.48
Ssbp3Q9D032 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp3Q9D032 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Ssbp3Q9D032 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp3Q9D032 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms