Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb8Q91XZ2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Gm44428-201ENSMUST00000204474 874 ntBASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb8Q91XZ2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb8Q91XZ2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb8Q91XZ2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb8Q91XZ2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb8Q91XZ2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Gm11687-201ENSMUST00000118911 886 ntBASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdhb8Q91XZ2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb8Q91XZ2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb8Q91XZ2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb8Q91XZ2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb8Q91XZ2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb8Q91XZ2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdhb8Q91XZ2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.33■■□□□ 1
Pcdhb8Q91XZ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Pcdhb8Q91XZ2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb8Q91XZ2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb8Q91XZ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb8Q91XZ2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb8Q91XZ2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb8Q91XZ2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb8Q91XZ2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb8Q91XZ2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb8Q91XZ2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pcdhb8Q91XZ2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb8Q91XZ2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb8Q91XZ2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pcdhb8Q91XZ2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb8Q91XZ2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb8Q91XZ2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb8Q91XZ2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb8Q91XZ2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb8Q91XZ2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb8Q91XZ2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb8Q91XZ2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb8Q91XZ2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb8Q91XZ2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb8Q91XZ2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb8Q91XZ2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb8Q91XZ2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb8Q91XZ2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb8Q91XZ2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb8Q91XZ2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb8Q91XZ2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms