Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb4Q91XX6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgb4Q91XX6 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.18■■□□□ 1.3
Pcdhgb4Q91XX6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgb4Q91XX6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdhgb4Q91XX6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgb4Q91XX6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Pcdhgb4Q91XX6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhgb4Q91XX6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Pcdhgb4Q91XX6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb4Q91XX6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb4Q91XX6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhgb4Q91XX6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhgb4Q91XX6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhgb4Q91XX6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhgb4Q91XX6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdhgb4Q91XX6 Gm11687-201ENSMUST00000118911 886 ntBASIC23.13■■□□□ 1.29
Pcdhgb4Q91XX6 Gm44428-201ENSMUST00000204474 874 ntBASIC23.13■■□□□ 1.29
Pcdhgb4Q91XX6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhgb4Q91XX6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhgb4Q91XX6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb4Q91XX6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb4Q91XX6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb4Q91XX6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhgb4Q91XX6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb4Q91XX6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb4Q91XX6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb4Q91XX6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhgb4Q91XX6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhgb4Q91XX6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb4Q91XX6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb4Q91XX6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Pcdhgb4Q91XX6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.07■■□□□ 1.28
Pcdhgb4Q91XX6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb4Q91XX6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb4Q91XX6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Pcdhgb4Q91XX6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb4Q91XX6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb4Q91XX6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.06■■□□□ 1.28
Pcdhgb4Q91XX6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb4Q91XX6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Pcdhgb4Q91XX6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb4Q91XX6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.04■■□□□ 1.28
Pcdhgb4Q91XX6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb4Q91XX6 Gm11175-201ENSMUST00000116172 543 ntBASIC23.03■■□□□ 1.28
Pcdhgb4Q91XX6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhgb4Q91XX6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhgb4Q91XX6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb4Q91XX6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb4Q91XX6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb4Q91XX6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms