Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp40Q8BWR4 Gm42501-201ENSMUST00000200220 1026 ntBASIC30.61■■■□□ 2.49
Usp40Q8BWR4 Gm18755-201ENSMUST00000218030 1099 ntBASIC30.61■■■□□ 2.49
Usp40Q8BWR4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp40Q8BWR4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp40Q8BWR4 Gm45102-201ENSMUST00000207427 857 ntBASIC30.6■■■□□ 2.49
Usp40Q8BWR4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Usp40Q8BWR4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Usp40Q8BWR4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC30.59■■■□□ 2.49
Usp40Q8BWR4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.58■■■□□ 2.49
Usp40Q8BWR4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp40Q8BWR4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Usp40Q8BWR4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Usp40Q8BWR4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Usp40Q8BWR4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Usp40Q8BWR4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Gm14117-201ENSMUST00000122417 843 ntBASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Gm9959-201ENSMUST00000068277 390 ntBASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Usp40Q8BWR4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Usp40Q8BWR4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Usp40Q8BWR4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Usp40Q8BWR4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC30.52■■■□□ 2.48
Usp40Q8BWR4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Usp40Q8BWR4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Usp40Q8BWR4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Usp40Q8BWR4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
Usp40Q8BWR4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Usp40Q8BWR4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC30.5■■■□□ 2.47
Usp40Q8BWR4 Gm10232-201ENSMUST00000089221 720 ntBASIC30.5■■■□□ 2.47
Usp40Q8BWR4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Usp40Q8BWR4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp40Q8BWR4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Usp40Q8BWR4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Usp40Q8BWR4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Usp40Q8BWR4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Usp40Q8BWR4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Usp40Q8BWR4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC30.46■■■□□ 2.47
Usp40Q8BWR4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Usp40Q8BWR4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Usp40Q8BWR4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Usp40Q8BWR4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Usp40Q8BWR4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Usp40Q8BWR4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Usp40Q8BWR4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Usp40Q8BWR4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Usp40Q8BWR4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Usp40Q8BWR4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Usp40Q8BWR4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
Usp40Q8BWR4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Usp40Q8BWR4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Usp40Q8BWR4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Usp40Q8BWR4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Usp40Q8BWR4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Usp40Q8BWR4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Usp40Q8BWR4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC30.39■■■□□ 2.46
Usp40Q8BWR4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Usp40Q8BWR4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Usp40Q8BWR4 Gm16464-201ENSMUST00000117815 1095 ntBASIC30.37■■■□□ 2.45
Usp40Q8BWR4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Usp40Q8BWR4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Usp40Q8BWR4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Usp40Q8BWR4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Usp40Q8BWR4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Usp40Q8BWR4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC30.36■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms