Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Arhgef40Q3UPH7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Arhgef40Q3UPH7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
Arhgef40Q3UPH7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Arhgef40Q3UPH7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC33.22■■■□□ 2.91
Arhgef40Q3UPH7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC33.21■■■□□ 2.91
Arhgef40Q3UPH7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC33.21■■■□□ 2.91
Arhgef40Q3UPH7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC33.21■■■□□ 2.91
Arhgef40Q3UPH7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC33.19■■■□□ 2.9
Arhgef40Q3UPH7 Gm5131-201ENSMUST00000212776 1238 ntBASIC33.19■■■□□ 2.9
Arhgef40Q3UPH7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Arhgef40Q3UPH7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC33.18■■■□□ 2.9
Arhgef40Q3UPH7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC33.17■■■□□ 2.9
Arhgef40Q3UPH7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Arhgef40Q3UPH7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Arhgef40Q3UPH7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Arhgef40Q3UPH7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Arhgef40Q3UPH7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Arhgef40Q3UPH7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC33.15■■■□□ 2.9
Arhgef40Q3UPH7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Arhgef40Q3UPH7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC33.14■■■□□ 2.9
Arhgef40Q3UPH7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
Arhgef40Q3UPH7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Arhgef40Q3UPH7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Nsd1-206ENSMUST00000224918 1001 ntBASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC33.12■■■□□ 2.89
Arhgef40Q3UPH7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Arhgef40Q3UPH7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC33.11■■■□□ 2.89
Arhgef40Q3UPH7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC33.11■■■□□ 2.89
Arhgef40Q3UPH7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Arhgef40Q3UPH7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Arhgef40Q3UPH7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Gm16464-201ENSMUST00000117815 1095 ntBASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Serp2-204ENSMUST00000228055 705 ntBASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC33.1■■■□□ 2.89
Arhgef40Q3UPH7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Arhgef40Q3UPH7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Arhgef40Q3UPH7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Arhgef40Q3UPH7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Arhgef40Q3UPH7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Arhgef40Q3UPH7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC33.07■■■□□ 2.89
Arhgef40Q3UPH7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC33.07■■■□□ 2.89
Arhgef40Q3UPH7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Arhgef40Q3UPH7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Arhgef40Q3UPH7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC33.06■■■□□ 2.88
Arhgef40Q3UPH7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Arhgef40Q3UPH7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Arhgef40Q3UPH7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Arhgef40Q3UPH7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC33.04■■■□□ 2.88
Arhgef40Q3UPH7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Arhgef40Q3UPH7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
Arhgef40Q3UPH7 Etf1-202ENSMUST00000180351 108 ntBASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Gm5297-201ENSMUST00000198555 1171 ntBASIC33.02■■■□□ 2.88
Arhgef40Q3UPH7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Arhgef40Q3UPH7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Arhgef40Q3UPH7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC33.01■■■□□ 2.87
Arhgef40Q3UPH7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Arhgef40Q3UPH7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC33.01■■■□□ 2.87
Arhgef40Q3UPH7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Arhgef40Q3UPH7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Arhgef40Q3UPH7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.99■■■□□ 2.87
Arhgef40Q3UPH7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
Arhgef40Q3UPH7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.98■■■□□ 2.87
Arhgef40Q3UPH7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Arhgef40Q3UPH7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms