Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smn1P97801 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smn1P97801 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smn1P97801 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smn1P97801 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smn1P97801 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smn1P97801 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smn1P97801 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smn1P97801 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smn1P97801 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.71■□□□□ 0.59
Smn1P97801 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smn1P97801 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Smn1P97801 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smn1P97801 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smn1P97801 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smn1P97801 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.69■□□□□ 0.58
Smn1P97801 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smn1P97801 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smn1P97801 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smn1P97801 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.68■□□□□ 0.58
Smn1P97801 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smn1P97801 Gm6821-201ENSMUST00000107540 542 ntBASIC18.68■□□□□ 0.58
Smn1P97801 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.68■□□□□ 0.58
Smn1P97801 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.68■□□□□ 0.58
Smn1P97801 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smn1P97801 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smn1P97801 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smn1P97801 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smn1P97801 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.67■□□□□ 0.58
Smn1P97801 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smn1P97801 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smn1P97801 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smn1P97801 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Smn1P97801 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smn1P97801 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smn1P97801 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Smn1P97801 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.65■□□□□ 0.58
Smn1P97801 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smn1P97801 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smn1P97801 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smn1P97801 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smn1P97801 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.64■□□□□ 0.57
Smn1P97801 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smn1P97801 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.64■□□□□ 0.57
Smn1P97801 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smn1P97801 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smn1P97801 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smn1P97801 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smn1P97801 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Smn1P97801 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smn1P97801 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.62■□□□□ 0.57
Smn1P97801 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smn1P97801 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smn1P97801 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smn1P97801 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smn1P97801 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.61■□□□□ 0.57
Smn1P97801 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smn1P97801 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.6■□□□□ 0.57
Smn1P97801 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.6■□□□□ 0.57
Smn1P97801 Gm4799-201ENSMUST00000095396 657 ntBASIC18.6■□□□□ 0.57
Smn1P97801 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.6■□□□□ 0.57
Smn1P97801 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smn1P97801 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms