Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Aldh1a1P24549 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Aldh1a1P24549 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Aldh1a1P24549 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Aldh1a1P24549 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Aldh1a1P24549 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.87■■□□□ 1.41
Aldh1a1P24549 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.87■■□□□ 1.41
Aldh1a1P24549 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.87■■□□□ 1.41
Aldh1a1P24549 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Aldh1a1P24549 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
Aldh1a1P24549 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Amer2-203ENSMUST00000225247 2662 ntBASIC23.86■■□□□ 1.41
Aldh1a1P24549 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Gm22238-201ENSMUST00000175222 88 ntBASIC23.86■■□□□ 1.41
Aldh1a1P24549 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.86■■□□□ 1.41
Aldh1a1P24549 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.86■■□□□ 1.41
Aldh1a1P24549 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Aldh1a1P24549 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Aldh1a1P24549 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Aldh1a1P24549 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Aldh1a1P24549 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.85■■□□□ 1.41
Aldh1a1P24549 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aldh1a1P24549 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aldh1a1P24549 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aldh1a1P24549 Gm40881-201ENSMUST00000223397 166 ntBASIC23.84■■□□□ 1.41
Aldh1a1P24549 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aldh1a1P24549 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Aldh1a1P24549 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.83■■□□□ 1.41
Aldh1a1P24549 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Aldh1a1P24549 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aldh1a1P24549 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aldh1a1P24549 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Aldh1a1P24549 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.82■■□□□ 1.4
Aldh1a1P24549 Serp2-204ENSMUST00000228055 705 ntBASIC23.82■■□□□ 1.4
Aldh1a1P24549 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aldh1a1P24549 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aldh1a1P24549 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.82■■□□□ 1.4
Aldh1a1P24549 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Aldh1a1P24549 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Aldh1a1P24549 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.81■■□□□ 1.4
Aldh1a1P24549 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Aldh1a1P24549 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Aldh1a1P24549 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Aldh1a1P24549 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.8■■□□□ 1.4
Aldh1a1P24549 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Aldh1a1P24549 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Aldh1a1P24549 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.8■■□□□ 1.4
Aldh1a1P24549 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Aldh1a1P24549 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Aldh1a1P24549 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Aldh1a1P24549 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aldh1a1P24549 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Aldh1a1P24549 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.78■■□□□ 1.4
Aldh1a1P24549 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aldh1a1P24549 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aldh1a1P24549 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aldh1a1P24549 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.78■■□□□ 1.4
Aldh1a1P24549 Gm21956-201ENSMUST00000179946 522 ntBASIC23.77■■□□□ 1.4
Aldh1a1P24549 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Aldh1a1P24549 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Aldh1a1P24549 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Aldh1a1P24549 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Aldh1a1P24549 Gm12922-201ENSMUST00000120626 809 ntBASIC23.76■■□□□ 1.39
Aldh1a1P24549 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Aldh1a1P24549 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.76■■□□□ 1.39
Aldh1a1P24549 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Aldh1a1P24549 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Aldh1a1P24549 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Aldh1a1P24549 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.75■■□□□ 1.39
Aldh1a1P24549 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Aldh1a1P24549 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Aldh1a1P24549 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Aldh1a1P24549 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.74■■□□□ 1.39
Aldh1a1P24549 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Aldh1a1P24549 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Aldh1a1P24549 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Aldh1a1P24549 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Aldh1a1P24549 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Aldh1a1P24549 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.73■■□□□ 1.39
Aldh1a1P24549 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.73■■□□□ 1.39
Aldh1a1P24549 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Aldh1a1P24549 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Aldh1a1P24549 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Aldh1a1P24549 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.72■■□□□ 1.39
Aldh1a1P24549 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.72■■□□□ 1.39
Aldh1a1P24549 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Aldh1a1P24549 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Aldh1a1P24549 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Aldh1a1P24549 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Aldh1a1P24549 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms