Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa3P02831 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hoxa3P02831 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.28■□□□□ 0.52
Hoxa3P02831 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxa3P02831 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxa3P02831 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxa3P02831 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.27■□□□□ 0.52
Hoxa3P02831 Gm5812-201ENSMUST00000061073 957 ntBASIC18.27■□□□□ 0.52
Hoxa3P02831 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxa3P02831 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxa3P02831 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxa3P02831 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.26■□□□□ 0.51
Hoxa3P02831 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxa3P02831 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hoxa3P02831 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.26■□□□□ 0.51
Hoxa3P02831 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxa3P02831 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxa3P02831 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
Hoxa3P02831 Gm13238-201ENSMUST00000117655 780 ntBASIC18.25■□□□□ 0.51
Hoxa3P02831 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxa3P02831 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxa3P02831 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxa3P02831 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hoxa3P02831 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hoxa3P02831 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxa3P02831 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hoxa3P02831 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hoxa3P02831 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxa3P02831 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hoxa3P02831 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxa3P02831 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxa3P02831 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hoxa3P02831 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxa3P02831 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.22■□□□□ 0.51
Hoxa3P02831 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hoxa3P02831 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hoxa3P02831 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxa3P02831 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hoxa3P02831 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxa3P02831 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxa3P02831 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxa3P02831 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hoxa3P02831 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hoxa3P02831 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hoxa3P02831 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.2■□□□□ 0.5
Hoxa3P02831 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.2■□□□□ 0.5
Hoxa3P02831 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hoxa3P02831 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hoxa3P02831 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hoxa3P02831 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxa3P02831 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxa3P02831 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hoxa3P02831 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
Hoxa3P02831 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxa3P02831 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hoxa3P02831 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Hoxa3P02831 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Hoxa3P02831 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.17■□□□□ 0.5
Hoxa3P02831 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Hoxa3P02831 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Hoxa3P02831 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxa3P02831 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa3P02831 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.16■□□□□ 0.5
Hoxa3P02831 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa3P02831 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa3P02831 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hoxa3P02831 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxa3P02831 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hoxa3P02831 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxa3P02831 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms