Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac3O88895 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac3O88895 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.46■□□□□ 0.71
Hdac3O88895 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac3O88895 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hdac3O88895 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.45■□□□□ 0.7
Hdac3O88895 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.45■□□□□ 0.7
Hdac3O88895 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac3O88895 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hdac3O88895 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Hdac3O88895 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac3O88895 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.44■□□□□ 0.7
Hdac3O88895 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac3O88895 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac3O88895 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.43■□□□□ 0.7
Hdac3O88895 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac3O88895 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.43■□□□□ 0.7
Hdac3O88895 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac3O88895 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac3O88895 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac3O88895 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.43■□□□□ 0.7
Hdac3O88895 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac3O88895 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.42■□□□□ 0.7
Hdac3O88895 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac3O88895 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac3O88895 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hdac3O88895 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac3O88895 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac3O88895 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac3O88895 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hdac3O88895 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hdac3O88895 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac3O88895 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac3O88895 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hdac3O88895 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac3O88895 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Hdac3O88895 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hdac3O88895 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac3O88895 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.39■□□□□ 0.69
Hdac3O88895 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac3O88895 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac3O88895 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
Hdac3O88895 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hdac3O88895 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.38■□□□□ 0.69
Hdac3O88895 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hdac3O88895 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.38■□□□□ 0.69
Hdac3O88895 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac3O88895 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac3O88895 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac3O88895 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.37■□□□□ 0.69
Hdac3O88895 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac3O88895 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac3O88895 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.36■□□□□ 0.69
Hdac3O88895 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hdac3O88895 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.36■□□□□ 0.69
Hdac3O88895 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac3O88895 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac3O88895 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.36■□□□□ 0.69
Hdac3O88895 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac3O88895 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac3O88895 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac3O88895 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac3O88895 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac3O88895 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Hdac3O88895 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac3O88895 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Gm9806-201ENSMUST00000051080 552 ntBASIC19.34■□□□□ 0.69
Hdac3O88895 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac3O88895 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac3O88895 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac3O88895 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms