Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc2O08811 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc2O08811 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.5■■□□□ 1.19
Ercc2O08811 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc2O08811 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ercc2O08811 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc2O08811 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc2O08811 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc2O08811 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc2O08811 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc2O08811 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc2O08811 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ercc2O08811 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ercc2O08811 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.48■■□□□ 1.19
Ercc2O08811 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ercc2O08811 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ercc2O08811 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ercc2O08811 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.47■■□□□ 1.19
Ercc2O08811 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ercc2O08811 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ercc2O08811 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ercc2O08811 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.46■■□□□ 1.19
Ercc2O08811 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ercc2O08811 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.45■■□□□ 1.19
Ercc2O08811 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ercc2O08811 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ercc2O08811 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.45■■□□□ 1.18
Ercc2O08811 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ercc2O08811 Cap2-205ENSMUST00000225824 1634 ntBASIC22.45■■□□□ 1.18
Ercc2O08811 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ercc2O08811 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ercc2O08811 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ercc2O08811 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ercc2O08811 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.44■■□□□ 1.18
Ercc2O08811 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ercc2O08811 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ercc2O08811 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ercc2O08811 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ercc2O08811 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.43■■□□□ 1.18
Ercc2O08811 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ercc2O08811 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ercc2O08811 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.43■■□□□ 1.18
Ercc2O08811 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ercc2O08811 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ercc2O08811 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ercc2O08811 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ercc2O08811 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ercc2O08811 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.41■■□□□ 1.18
Ercc2O08811 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ercc2O08811 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ercc2O08811 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Ercc2O08811 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc2O08811 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc2O08811 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc2O08811 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc2O08811 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc2O08811 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Ercc2O08811 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ercc2O08811 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Ercc2O08811 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ercc2O08811 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Ercc2O08811 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ercc2O08811 Gm22567-201ENSMUST00000175542 342 ntBASIC22.38■■□□□ 1.17
Ercc2O08811 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ercc2O08811 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.37■■□□□ 1.17
Ercc2O08811 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ercc2O08811 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ercc2O08811 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ercc2O08811 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Ercc2O08811 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Ercc2O08811 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.36■■□□□ 1.17
Ercc2O08811 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ercc2O08811 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ercc2O08811 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.35■■□□□ 1.17
Ercc2O08811 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ercc2O08811 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ercc2O08811 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ercc2O08811 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ercc2O08811 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Ercc2O08811 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ercc2O08811 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Ercc2O08811 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.33■■□□□ 1.17
Ercc2O08811 Gm10420-201ENSMUST00000121713 882 ntBASIC22.33■■□□□ 1.17
Ercc2O08811 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms