Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav19A0A0B4J1K4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav19A0A0B4J1K4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav19A0A0B4J1K4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav19A0A0B4J1K4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav19A0A0B4J1K4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav19A0A0B4J1K4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav19A0A0B4J1K4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav19A0A0B4J1K4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav19A0A0B4J1K4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav19A0A0B4J1K4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav19A0A0B4J1K4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav19A0A0B4J1K4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav19A0A0B4J1K4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav19A0A0B4J1K4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav19A0A0B4J1K4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav19A0A0B4J1K4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav19A0A0B4J1K4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav19A0A0B4J1K4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav19A0A0B4J1K4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav19A0A0B4J1K4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav19A0A0B4J1K4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav19A0A0B4J1K4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav19A0A0B4J1K4 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.32■□□□□ 0.2
Trav19A0A0B4J1K4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.32■□□□□ 0.2
Trav19A0A0B4J1K4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav19A0A0B4J1K4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav19A0A0B4J1K4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav19A0A0B4J1K4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav19A0A0B4J1K4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav19A0A0B4J1K4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav19A0A0B4J1K4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav19A0A0B4J1K4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav19A0A0B4J1K4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav19A0A0B4J1K4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav19A0A0B4J1K4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav19A0A0B4J1K4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav19A0A0B4J1K4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav19A0A0B4J1K4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav19A0A0B4J1K4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav19A0A0B4J1K4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav19A0A0B4J1K4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Trav19A0A0B4J1K4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav19A0A0B4J1K4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.25■□□□□ 0.19
Trav19A0A0B4J1K4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav19A0A0B4J1K4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms