Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cx3cr1Q9Z0D9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cx3cr1Q9Z0D9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cx3cr1Q9Z0D9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44357-201ENSMUST00000195897 142 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm19658-201ENSMUST00000196231 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44367-201ENSMUST00000196836 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44350-201ENSMUST00000197197 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44390-201ENSMUST00000197533 144 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44313-201ENSMUST00000198018 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44486-201ENSMUST00000198508 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44314-201ENSMUST00000199263 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44394-201ENSMUST00000199558 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44484-201ENSMUST00000199873 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44466-201ENSMUST00000200264 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm44359-201ENSMUST00000200671 138 ntBASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.08□□□□□ -0.48
Cx3cr1Q9Z0D9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm17807-201ENSMUST00000186869 298 ntBASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.07□□□□□ -0.48
Cx3cr1Q9Z0D9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms