Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Gm42612-201ENSMUST00000197986 623 ntBASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Gm43170-201ENSMUST00000199827 612 ntBASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Gm9797-201ENSMUST00000052902 613 ntBASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3bQ9ES34 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3bQ9ES34 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3bQ9ES34 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms