Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube4bQ9ES00 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ube4bQ9ES00 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ube4bQ9ES00 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm25745-201ENSMUST00000174945 133 ntBASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm7977-201ENSMUST00000193787 748 ntBASIC13.71□□□□□ -0.21
Ube4bQ9ES00 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube4bQ9ES00 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube4bQ9ES00 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms