Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Mrpl55Q9CZ83 Gm43072-201ENSMUST00000200283 1671 ntBASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Mrpl55Q9CZ83 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 AC093926.2-201ENSMUST00000214468 1228 ntBASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Mrpl55Q9CZ83 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms