Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.99□□□□□ -0.17
Trim16Q99PP9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim16Q99PP9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.98□□□□□ -0.17
Trim16Q99PP9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm37935-201ENSMUST00000192012 982 ntBASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm2213-201ENSMUST00000197485 688 ntBASIC13.98□□□□□ -0.17
Trim16Q99PP9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm45612-201ENSMUST00000211320 160 ntBASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim16Q99PP9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.97□□□□□ -0.17
Trim16Q99PP9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim16Q99PP9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms