Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.2□□□□□ -0.14
Trim33Q99PP7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim33Q99PP7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.19□□□□□ -0.14
Trim33Q99PP7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Gm26308-201ENSMUST00000157768 69 ntBASIC14.19□□□□□ -0.14
Trim33Q99PP7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.19□□□□□ -0.14
Trim33Q99PP7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.19□□□□□ -0.14
Trim33Q99PP7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.19□□□□□ -0.14
Trim33Q99PP7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim33Q99PP7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Gm37230-201ENSMUST00000194491 818 ntBASIC14.18□□□□□ -0.14
Trim33Q99PP7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.18□□□□□ -0.14
Trim33Q99PP7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim33Q99PP7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.17□□□□□ -0.14
Trim33Q99PP7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim33Q99PP7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms