Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm27839-201ENSMUST00000184242 106 ntBASIC14.1□□□□□ -0.15
Vsx1Q91V10 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.1□□□□□ -0.15
Vsx1Q91V10 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Gm5356-201ENSMUST00000093326 615 ntBASIC14.1□□□□□ -0.15
Vsx1Q91V10 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vsx1Q91V10 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm5354-201ENSMUST00000182417 973 ntBASIC14.09□□□□□ -0.15
Vsx1Q91V10 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.09□□□□□ -0.15
Vsx1Q91V10 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.09□□□□□ -0.15
Vsx1Q91V10 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vsx1Q91V10 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Vsx1Q91V10 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vsx1Q91V10 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx1Q91V10 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx1Q91V10 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.08□□□□□ -0.15
Vsx1Q91V10 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx1Q91V10 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vsx1Q91V10 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Gm13226-201ENSMUST00000117838 404 ntBASIC14.08□□□□□ -0.16
Vsx1Q91V10 Gm12134-201ENSMUST00000122109 520 ntBASIC14.08□□□□□ -0.16
Vsx1Q91V10 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vsx1Q91V10 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vsx1Q91V10 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms