Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.94□□□□□ -0.18
Q8VDP2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Q8VDP2 Gm6345-202ENSMUST00000180900 204 ntBASIC13.94□□□□□ -0.18
Q8VDP2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.94□□□□□ -0.18
Q8VDP2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.94□□□□□ -0.18
Q8VDP2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.94□□□□□ -0.18
Q8VDP2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Q8VDP2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.93□□□□□ -0.18
Q8VDP2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.93□□□□□ -0.18
Q8VDP2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Mir1668-201ENSMUST00000184114 107 ntBASIC13.93□□□□□ -0.18
Q8VDP2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Q8VDP2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Q8VDP2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q8VDP2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Q8VDP2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Q8VDP2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Q8VDP2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.92□□□□□ -0.18
Q8VDP2 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.92□□□□□ -0.18
Q8VDP2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.92□□□□□ -0.18
Q8VDP2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Q8VDP2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Q8VDP2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q8VDP2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.92□□□□□ -0.18
Q8VDP2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.91□□□□□ -0.18
Q8VDP2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q8VDP2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q8VDP2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q8VDP2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms