Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Gm2756-201ENSMUST00000195851 400 ntBASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lrif1Q8CDD9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lrif1Q8CDD9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms