Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chd9Q8BYH8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Mir6958-201ENSMUST00000184207 73 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm45118-201ENSMUST00000208928 825 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm11439-201ENSMUST00000118598 409 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm45770-201ENSMUST00000212105 616 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Efs-202ENSMUST00000227037 2540 ntBASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd9Q8BYH8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm15393-201ENSMUST00000120499 219 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Carlr-201ENSMUST00000181515 2574 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm19078-201ENSMUST00000206311 727 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm11340-201ENSMUST00000119226 412 ntBASIC11.1□□□□□ -0.63
Chd9Q8BYH8 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms