Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam78bQ8BQN5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Rubie-203ENSMUST00000227803 2430 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fam78bQ8BQN5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam78bQ8BQN5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Gm18489-201ENSMUST00000172565 551 ntBASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam78bQ8BQN5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Fam78bQ8BQN5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms