Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smg1Q8BKX6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smg1Q8BKX6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smg1Q8BKX6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.85□□□□□ -0.51
Smg1Q8BKX6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smg1Q8BKX6 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm8213-201ENSMUST00000118191 441 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smg1Q8BKX6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Gm2383-201ENSMUST00000181461 807 ntBASIC11.83□□□□□ -0.51
Smg1Q8BKX6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm8099-201ENSMUST00000200510 742 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm8285-201ENSMUST00000208293 759 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm17795-201ENSMUST00000214505 757 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Mir5120-201ENSMUST00000175020 78 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Gm44397-201ENSMUST00000195950 113 ntBASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smg1Q8BKX6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smg1Q8BKX6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms