Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh20Q8BIZ0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh20Q8BIZ0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh20Q8BIZ0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh20Q8BIZ0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh20Q8BIZ0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms