Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ush1gQ80T11 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Gm9522-201ENSMUST00000182394 926 ntBASIC15.62■□□□□ 0.09
Ush1gQ80T11 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Gm9908-201ENSMUST00000211534 448 ntBASIC15.62■□□□□ 0.09
Ush1gQ80T11 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ush1gQ80T11 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Gm18062-201ENSMUST00000208020 547 ntBASIC15.61■□□□□ 0.09
Ush1gQ80T11 Gm18055-201ENSMUST00000208254 547 ntBASIC15.61■□□□□ 0.09
Ush1gQ80T11 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.61■□□□□ 0.09
Ush1gQ80T11 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ush1gQ80T11 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.6■□□□□ 0.09
Ush1gQ80T11 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.6■□□□□ 0.09
Ush1gQ80T11 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ush1gQ80T11 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ush1gQ80T11 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms