Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf220Q6PDX6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf220Q6PDX6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Gm7284-201ENSMUST00000131667 944 ntBASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf220Q6PDX6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf220Q6PDX6 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms