Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcd3Q6P9Z1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Gm13597-201ENSMUST00000121239 375 ntBASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Gm9182-201ENSMUST00000217829 639 ntBASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcd3Q6P9Z1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd3Q6P9Z1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms