Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.05□□□□□ -0.16
VclQ64727 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VclQ64727 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Gm24543-201ENSMUST00000103867 82 ntBASIC14.05□□□□□ -0.16
VclQ64727 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VclQ64727 Gm28630-201ENSMUST00000187806 498 ntBASIC14.05□□□□□ -0.16
VclQ64727 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.05□□□□□ -0.16
VclQ64727 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.05□□□□□ -0.16
VclQ64727 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VclQ64727 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.05□□□□□ -0.16
VclQ64727 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VclQ64727 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
VclQ64727 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
VclQ64727 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.04□□□□□ -0.16
VclQ64727 Gm25925-201ENSMUST00000158314 306 ntBASIC14.04□□□□□ -0.16
VclQ64727 Gm10275-202ENSMUST00000168697 495 ntBASIC14.04□□□□□ -0.16
VclQ64727 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Gm17837-201ENSMUST00000186435 985 ntBASIC14.04□□□□□ -0.16
VclQ64727 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.04□□□□□ -0.16
VclQ64727 Gm10275-201ENSMUST00000092620 635 ntBASIC14.04□□□□□ -0.16
VclQ64727 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.04□□□□□ -0.16
VclQ64727 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VclQ64727 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
VclQ64727 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VclQ64727 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
VclQ64727 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VclQ64727 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Gm13453-201ENSMUST00000118708 357 ntBASIC14.03□□□□□ -0.16
VclQ64727 Gm14767-201ENSMUST00000121559 586 ntBASIC14.03□□□□□ -0.16
VclQ64727 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 AA619741-201ENSMUST00000195095 646 ntBASIC14.03□□□□□ -0.16
VclQ64727 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VclQ64727 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.03□□□□□ -0.16
VclQ64727 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.03□□□□□ -0.16
VclQ64727 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VclQ64727 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VclQ64727 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VclQ64727 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VclQ64727 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VclQ64727 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VclQ64727 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
VclQ64727 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms