Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Gm38217-201ENSMUST00000194358 910 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 Gm19540-201ENSMUST00000221843 810 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 CT009713.1-201ENSMUST00000224828 853 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.59□□□□□ -0.71
Foxc1Q61572 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Foxc1Q61572 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Foxc1Q61572 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Foxc1Q61572 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm13616-201ENSMUST00000120600 222 ntBASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Rprl2-201ENSMUST00000157150 290 ntBASIC10.58□□□□□ -0.72
Foxc1Q61572 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.58□□□□□ -0.72
Foxc1Q61572 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.58□□□□□ -0.72
Foxc1Q61572 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.58□□□□□ -0.72
Foxc1Q61572 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.58□□□□□ -0.72
Foxc1Q61572 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Foxc1Q61572 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Foxc1Q61572 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Foxc1Q61572 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms