Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ift88Q61371 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ift88Q61371 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.81■□□□□ 0.12
Ift88Q61371 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ift88Q61371 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ift88Q61371 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Ift88Q61371 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.81■□□□□ 0.12
Ift88Q61371 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift88Q61371 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Ift88Q61371 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ift88Q61371 Gm10275-202ENSMUST00000168697 495 ntBASIC15.8■□□□□ 0.12
Ift88Q61371 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.8■□□□□ 0.12
Ift88Q61371 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.8■□□□□ 0.12
Ift88Q61371 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Gm10275-201ENSMUST00000092620 635 ntBASIC15.8■□□□□ 0.12
Ift88Q61371 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift88Q61371 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ift88Q61371 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 Gm15483-201ENSMUST00000120338 456 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Gm2651-201ENSMUST00000203560 838 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.79■□□□□ 0.12
Ift88Q61371 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ift88Q61371 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ift88Q61371 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.79■□□□□ 0.12
Ift88Q61371 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift88Q61371 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ift88Q61371 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ift88Q61371 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.78■□□□□ 0.12
Ift88Q61371 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Ift88Q61371 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ift88Q61371 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.78■□□□□ 0.12
Ift88Q61371 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.78■□□□□ 0.12
Ift88Q61371 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.78■□□□□ 0.12
Ift88Q61371 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift88Q61371 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ift88Q61371 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms