Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc85aQ5SP85 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85aQ5SP85 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85aQ5SP85 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85aQ5SP85 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc85aQ5SP85 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc85aQ5SP85 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm15429-201ENSMUST00000151268 798 ntBASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm27572-201ENSMUST00000183702 255 ntBASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm2495-201ENSMUST00000191160 466 ntBASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc85aQ5SP85 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Gm6091-201ENSMUST00000098307 165 ntBASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc85aQ5SP85 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Gm12928-201ENSMUST00000117115 573 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Gm11814-201ENSMUST00000119515 929 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Gm7561-201ENSMUST00000211203 886 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Gm5425-201ENSMUST00000214125 459 ntBASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc85aQ5SP85 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms