Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Shank3Q4ACU6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Shank3Q4ACU6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Shank3Q4ACU6 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.39■□□□□ 0.38
Shank3Q4ACU6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shank3Q4ACU6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm13369-201ENSMUST00000119442 987 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm45865-201ENSMUST00000211815 945 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm10146-201ENSMUST00000072739 309 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm24447-201ENSMUST00000083977 338 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shank3Q4ACU6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm6023-201ENSMUST00000118217 606 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm37497-201ENSMUST00000195830 798 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Itm2b-204ENSMUST00000228637 783 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm14350-201ENSMUST00000116642 640 ntBASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shank3Q4ACU6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm2991-201ENSMUST00000173338 480 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm6222-202ENSMUST00000182143 629 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shank3Q4ACU6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms