Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Khdc4Q3TCX3 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Gm25144-201ENSMUST00000179561 110 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Gm25352-201ENSMUST00000179815 110 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Mir7684-201ENSMUST00000183858 60 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Gm28630-201ENSMUST00000187806 498 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Khdc4Q3TCX3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Gm11424-201ENSMUST00000121929 829 ntBASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Khdc4Q3TCX3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Khdc4Q3TCX3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Khdc4Q3TCX3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Khdc4Q3TCX3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Khdc4Q3TCX3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms