Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gm28033-201ENSMUST00000184224 96 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gm21559-201ENSMUST00000220638 855 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Gm8587-201ENSMUST00000076538 843 ntBASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccbe1Q3MI99 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm13474-201ENSMUST00000122466 815 ntBASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm43767-201ENSMUST00000198933 381 ntBASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccbe1Q3MI99 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm25925-201ENSMUST00000158314 306 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm8825-201ENSMUST00000182565 998 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm4518-201ENSMUST00000182638 718 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm29518-201ENSMUST00000190858 372 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Gm19164-201ENSMUST00000210667 640 ntBASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccbe1Q3MI99 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms